Targeted sequencing of Rubus illecebrosus - SRA

SRX22463497: Targeted sequencing of Rubus illecebrosus
1 ILLUMINA (Illumina HiSeq 3000) run: 363,111 spots, 108.9M bases, 47Mb downloads

Design: Target capture using the "NitFix" panel of 100 loci

Submitted by: Mississippi State University

Study: Targeted sequencing in the Nitrogen-Fixing Clade Part 6

PRJNA1022025 • SRP471042 • All experiments • All runs

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Raw sequencing reads from herbarium specimens collected for the study "Shifts in evolutionary lability underlie independent gains and losses of root-nodule symbiosis in a single clade of plants." The method of data collection has been reported extensively in Folk et al. 2021: https://doi.org/10.1002/aps3.11410. Methods related to sequence assembly can be found in Kates et al. 2021 https://doi.org/10.3389/fpls.2021.669064.

Sample: Targeted sequencing of Rubus illecebrosus

SAMN37580625 • SRS19477497 • All experiments • All runs

Organism: Rubus illecebrosus

Library:

Name: 5cb4726d-3d26-4db8-a5a1-4bfbd49a77ac

Instrument: Illumina HiSeq 3000

Strategy: Targeted-Capture

Source: GENOMIC

Selection: Hybrid Selection

Layout: PAIRED

Runs: 1 run, 363,111 spots, 108.9M bases, 47Mb

Run	# of Spots	# of Bases	Size	Published
SRR26764618	363,111	108.9M	47Mb	2023-11-09

ID:: 30449286

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